These common pitfalls applies to anything you want to connect to Active Directory: sync'ed time, DNS from Active Directory and FQDN.
They aren't bugs or problems, just tips that usually blocks you from connecting to AD.
Once connected, users on Active Directory can use their web browser without any credential, it's seamless. Web browsers automagically use the AD credentials.
It works with any browser: IE, chrome, Firefox...
I'm using a proxy linked to AD to write this post, and I don't have any problem with it. It's true that I manually update some modules on Endian, because 2.4.0 doesn't work well with Windows server 2008 R2 AD. But on 2.4.1 it should be fixed.
Another advantage about non-transparent proxy is that you can filter out https URLs, that cannot be done witht the transparent one. Proxy logs show the username too, that is useful.
Although in italian, there are some about how to connect to AD from Endian. EFW 2.2 was used, but I think it's almost the same.
http://www.youtube.com/watch?v=O_QTHme0_kY